Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CBL47190.1Chemotaxis sensory transducer; silverDB:HdN1F4803. (543 aa)    
Predicted Functional Partners:
cheA-2
Sensor histidine kinase CheA; silverDB:HdN1F1959.
 
 0.973
CBL45498.1
Hypothetical protein; silverDB:HdN1F2526.
 
 0.973
cheA
Predicted chemotaxis protein histidine kinase; silverDB:HdN1F240.
 
 0.971
CBL45071.1
CheW-like protein; silverDB:HdN1F1967.
 
 0.966
CBL45072.1
CheW-like protein; silverDB:HdN1F1969.
 
 0.966
cheW
CheW-like protein; silverDB:HdN1F241.
 
 0.956
CBL45500.1
CheW-like protein; silverDB:HdN1F2528.
 
 0.956
CBL45601.1
Hypothetical protein; silverDB:HdN1F2662.
 
 0.955
CBL45641.1
Putative signal transduction histidine kinase; silverDB:HdN1F2714.
 
 0.954
cheR1
Methylase of chemotaxis methyl-accepting protein; silverDB:HdN1F1494.
 
 0.952
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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