STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL47303.1Hypothetical protein; silverDB:HdN1F4952. (138 aa)    
Predicted Functional Partners:
CBL47304.1
Hypothetical protein; silverDB:HdN1F4953.
 
    0.898
cheY-2
Signal transduction histidine kinase; silverDB:HdN1F4951.
  
  
 0.811
CBL43657.1
Hypothetical protein; silverDB:HdN1F91.
 
    0.777
CBL43669.1
Conserved hypothetical protein; silverDB:HdN1F114.
 
    0.777
CBL44062.1
Hypothetical protein; silverDB:HdN1F605.
 
    0.777
CBL44118.1
Hypothetical protein; silverDB:HdN1F679.
 
    0.777
CBL44620.1
Hypothetical protein; silverDB:HdN1F1360.
 
    0.777
CBL44773.1
Conserved hypothetical protein; silverDB:HdN1F1561.
 
    0.777
CBL45274.1
Hypothetical protein; silverDB:HdN1F2230.
 
    0.777
CBL45276.1
Hypothetical protein; silverDB:HdN1F2232.
 
    0.777
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.