Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OJH41596.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
OJH41595.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
OJH38980.1
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
OJH37887.1
Xanthine dehydrogenase molybdopterin binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.988
OJH41694.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.983
OJH34396.1
Acylaldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.976
OJH35763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.972
OJH42442.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.953
OJH41347.1
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.940
OJH38796.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.940
OJH38978.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.937
Your Current Organism:
Cystobacter ferrugineus
NCBI taxonomy Id: 83449
Other names: C. ferrugineus, DSM 14716, JCM 12624, Polyangium ferrugineum, strain Cb fe18, strain Windsor M-203
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