STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJH41352.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (333 aa)    
Predicted Functional Partners:
OJH35973.1
Xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
OJH42753.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.620
OJH42752.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
OJH34015.1
Xyloglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
OJH38389.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
OJH37581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 35 family.
  
     0.595
OJH35740.1
Peptidase M35; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
OJH37240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.540
OJH35682.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.537
OJH40768.1
Aspartate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
Your Current Organism:
Cystobacter ferrugineus
NCBI taxonomy Id: 83449
Other names: C. ferrugineus, DSM 14716, JCM 12624, Polyangium ferrugineum, strain Cb fe18, strain Windsor M-203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.