STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJH40551.1D-(-)-3-hydroxybutyrate oligomer hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa)    
Predicted Functional Partners:
OJH34571.1
Putative toxin-antitoxin system toxin component, PIN family; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
OJH39799.1
PHB depolymerase esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.580
OJH39022.1
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
BON30_21950
6-a-glucosyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
OJH40583.1
EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
OJH38389.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.463
OJH40153.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.456
OJH38675.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
OJH35668.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.415
OJH40154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.414
Your Current Organism:
Cystobacter ferrugineus
NCBI taxonomy Id: 83449
Other names: C. ferrugineus, DSM 14716, JCM 12624, Polyangium ferrugineum, strain Cb fe18, strain Windsor M-203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.