STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJH37528.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
OJH37352.1
TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.772
OJH37353.1
Metallophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.560
OJH37351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
       0.549
OJH37349.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.540
OJH37350.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
OJH37347.1
Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.490
OJH37348.1
Hydroxyneurosporene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.490
OJH37342.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
OJH37343.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
OJH37344.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
Your Current Organism:
Cystobacter ferrugineus
NCBI taxonomy Id: 83449
Other names: C. ferrugineus, DSM 14716, JCM 12624, Polyangium ferrugineum, strain Cb fe18, strain Windsor M-203
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