STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100498450.SMethyltransf_11 domain-containing protein. (269 aa)    
Predicted Functional Partners:
Tsr1.L
Bms1-type G domain-containing protein.
   
 0.588
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.577
fau-2
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.577
A0A1L8EJP8
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.569
Bysl.S
Uncharacterized protein.
   
 0.567
A0A1L8GDE1
Uncharacterized protein.
   
 0.552
A0A1L8GEN6
Uncharacterized protein.
   
 0.552
LOC398701
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.530
ltv1
Uncharacterized protein.
   
 0.502
A0A1L8EQX4
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.497
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.