STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col6a2Uncharacterized protein. (1014 aa)    
Predicted Functional Partners:
col6a1
Uncharacterized protein.
  
0.972
col6a1-2
Uncharacterized protein.
  
0.972
Itga4.S
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 
 0.845
itga4
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 
 0.845
Itga1.S
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
   
 
 0.784
A0A1L8I2B9
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
   
 
 0.784
itgb4
Integrin beta.
    
 0.780
itgb4-2
Integrin beta.
    
 0.780
itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.773
itga5
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 
 0.761
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.