STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnxb.SUncharacterized protein. (2655 aa)    
Predicted Functional Partners:
itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
0.946
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
0.942
Itgav.L
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.937
Dxo.L
RAI1 domain-containing protein.
      
 0.931
Cyp21a2.1.L
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.886
itgb4
Integrin beta.
    
0.798
itgb5
Integrin beta; Belongs to the integrin beta chain family.
    
0.798
itgb4-2
Integrin beta.
    
0.798
Itgb5.L
Integrin beta; Belongs to the integrin beta chain family.
    
0.798
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
0.798
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.