STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ercc2Helicase ATP-binding domain-containing protein. (736 aa)    
Predicted Functional Partners:
ccnh-A
Ccnh-A protein; Belongs to the cyclin family.
    
 0.998
ercc3
Uncharacterized protein.
   
 0.997
gtf2h2
General transcription factor IIH subunit.
    
 0.997
Xpa.L
XPA_C domain-containing protein.
    
 0.997
gtf2h3
Uncharacterized protein.
    
 0.997
gtf2h4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.997
gtf2h5
Uncharacterized protein.
    
 0.995
Cdk7.L
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.995
polr2d
MGC85403 protein.
    
 0.995
polr2c
MGC81245 protein.
    
 0.995
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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