STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tuft1.LUncharacterized protein. (389 aa)    
Predicted Functional Partners:
alox5ap
Uncharacterized protein.
      
 0.886
alox5ap-2
Uncharacterized protein.
      
 0.886
fam49b
Cg32066-prov protein.
      
 0.879
tasp1
Tasp1 protein.
      
 0.877
pou2f3
POU domain protein.
      
 0.765
zfr
DZF domain-containing protein.
      
 0.643
Tfip11.L
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.603
A0A1L8HVE3
Uncharacterized protein.
      
 0.578
Ambn.S
Uncharacterized protein.
      
 0.571
Ambn.L
Uncharacterized protein.
      
 0.571
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.