STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adam12-2Uncharacterized protein. (935 aa)    
Predicted Functional Partners:
Sh3pxd2a.L
Uncharacterized protein.
    
 0.826
sh3pxd2a
Uncharacterized protein.
    
 0.809
cpxm1
F5/8 type C domain-containing protein.
      
 0.760
fastkd2
RAP domain-containing protein.
      
 0.577
gfra4
Uncharacterized protein.
      
 0.571
PIK3R1
Phosphoinositide-3-kinase.
    
 0.506
pik3r1
MGC80357 protein.
    
 0.506
hbegf
EGF-like domain-containing protein.
      
 0.489
hbegf-2
EGF-like domain-containing protein.
      
 0.489
Furin.S
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
     
 0.481
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.