STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exosc10.LHRDC domain-containing protein. (628 aa)    
Predicted Functional Partners:
exosc4
LOC495942 protein.
   
 0.998
c1d
Uncharacterized protein.
   
 0.997
Exosc9.L
Uncharacterized protein.
   
 0.997
exosc1
MGC86284 protein.
   
 0.997
exosc5
RNase_PH domain-containing protein.
   
 0.993
exosc3
MGC84934 protein.
   
 0.991
dis3
Uncharacterized protein; Belongs to the RNR ribonuclease family.
   
 0.987
utp11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.985
utp14a
Uncharacterized protein.
   
  0.984
utp6
MGC53963 protein.
   
 0.983
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.