STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpatch2-2G-patch domain-containing protein. (503 aa)    
Predicted Functional Partners:
dhx15
Uncharacterized protein.
    
 0.946
dhx15-2
MGC81281 protein.
    
 0.946
A0A1L8HAU8
RNA helicase.
    
 0.944
Pinx1.L
G-patch domain-containing protein.
    
 
 0.941
Rrp15.S
Uncharacterized protein.
      
 0.938
rrp15
Uncharacterized protein.
      
 0.938
Bysl.S
Uncharacterized protein.
    
 
 0.936
Nol6.L
Nucleolar protein 6.
   
 
 0.936
nkrf
Uncharacterized protein.
      
 0.935
Nkrf.L
Uncharacterized protein.
      
 0.935
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.