STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ptx3.LUncharacterized protein. (417 aa)    
Predicted Functional Partners:
tnfaip6
Uncharacterized protein.
   
 
 0.872
tnfaip6-2
LOC496285 protein.
   
 
 0.872
C1qb.L
C1q domain-containing protein.
    
 
 0.716
ccndbp1
Uncharacterized protein.
      
 0.674
Bcor.L
ANK_REP_REGION domain-containing protein.
     
 0.622
Has2.S
Glyco_trans_2-like domain-containing protein.
   
  
 0.603
spin1
MGC115436 protein.
      
 0.550
hba2
GLOBIN domain-containing protein; Belongs to the globin family.
     
 0.523
gdf9
TGF_BETA_2 domain-containing protein.
      
 0.503
gdf9-2
TGF_BETA_2 domain-containing protein.
      
 0.503
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.