STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc17Uncharacterized protein. (1190 aa)    
Predicted Functional Partners:
fut3
Glyco_tran_10_N domain-containing protein.
      
 0.917
Vsig10.L
Uncharacterized protein.
      
 0.873
hnrnph3
Uncharacterized protein.
      
 0.823
hnrnph3-2
Uncharacterized protein.
      
 0.823
Tspan13.L
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
      
 0.822
tspan13
LOC495385 protein; Belongs to the tetraspanin (TM4SF) family.
      
 0.822
mcoln2
PKD_channel domain-containing protein.
    
 
 0.803
Hoga1.L
Uncharacterized protein; Belongs to the DapA family.
      
 0.798
lyplal1
Abhydrolase_2 domain-containing protein.
      
 0.794
fut7
Glyco_tran_10_N domain-containing protein.
      
 0.790
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.