STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L8GE00Uncharacterized protein. (1294 aa)    
Predicted Functional Partners:
A0A1L8GEB7
Uncharacterized protein.
   
 0.961
A0A1L8GI69
Uncharacterized protein.
   
 0.961
kcnj8
Uncharacterized protein.
   
 0.881
kcnj8-2
Potassium inwardly-rectifying channel subfamily J member 8.
   
 0.881
Rapgef4.S
Uncharacterized protein.
    
 0.720
Rapgef4.L
Uncharacterized protein.
    
 0.720
Epac
Uncharacterized protein.
    
 0.603
Rapgef3.L
Uncharacterized protein.
    
 0.603
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.579
kcnj1
Uncharacterized protein.
    
 0.468
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.