STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc7a6os.LIwr1 domain-containing protein. (317 aa)    
Predicted Functional Partners:
polr2c
MGC81245 protein.
    
 
 0.954
polr2e
MGC68604 protein.
   
 
 0.934
polr2d
MGC85403 protein.
   
 
 0.918
Slc25a46.S
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.881
Slc25a46.L
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.881
polr2g
LOC100037112 protein.
    
 
 0.869
polr1c
MGC78824 protein.
   
 
 0.835
A0A1L8F3J9
TFIIS-type domain-containing protein.
    
 
 0.825
A0A1L8F868
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 
 0.825
slc25a22
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.791
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.