Strap.L protein (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Strap.L

WD_REPEATS_REGION domain-containing protein. (370 aa)

Predicted Functional Partners:

gemin2

0.985

ddx20

0.985

Gemin8.S

0.938

gemin7

0.933

gemin7-2

0.933

Strap.S

0.900

A0A1L8G1X7

0.863

smn1-2

0.859

smn1

0.830

gemin4

0.800

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8G1X7	Gemin8.S	A0A1L8G1X7	A0A1L8H8H6	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A1L8G1X7	Strap.L	A0A1L8G1X7	A0A1L8GVT1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.863
A0A1L8G1X7	Strap.S	A0A1L8G1X7	A0A1L8GQA7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.863
A0A1L8G1X7	ddx20	A0A1L8G1X7	A0A1L8HF67	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.996
A0A1L8G1X7	gemin2	A0A1L8G1X7	A0A1L8F470	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.966
A0A1L8G1X7	gemin4	A0A1L8G1X7	A0A1L8HG39	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A1L8G1X7	gemin7	A0A1L8G1X7	A0A1L8F3K0	Uncharacterized protein.	Uncharacterized protein.	0.981
A0A1L8G1X7	gemin7-2	A0A1L8G1X7	A0A1L8F860	Uncharacterized protein.	Uncharacterized protein.	0.981
A0A1L8G1X7	smn1	A0A1L8G1X7	A0A1L8HRB1	Uncharacterized protein.	Tudor domain-containing protein.	0.707
A0A1L8G1X7	smn1-2	A0A1L8G1X7	Q6NU78	Uncharacterized protein.	LOC398438 protein.	0.707
Gemin8.S	A0A1L8G1X7	A0A1L8H8H6	A0A1L8G1X7	Uncharacterized protein.	Uncharacterized protein.	0.979
Gemin8.S	Strap.L	A0A1L8H8H6	A0A1L8GVT1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.938
Gemin8.S	Strap.S	A0A1L8H8H6	A0A1L8GQA7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.938
Gemin8.S	ddx20	A0A1L8H8H6	A0A1L8HF67	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.995
Gemin8.S	gemin2	A0A1L8H8H6	A0A1L8F470	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.993
Gemin8.S	gemin4	A0A1L8H8H6	A0A1L8HG39	Uncharacterized protein.	Uncharacterized protein.	0.972
Gemin8.S	gemin7	A0A1L8H8H6	A0A1L8F3K0	Uncharacterized protein.	Uncharacterized protein.	0.997
Gemin8.S	gemin7-2	A0A1L8H8H6	A0A1L8F860	Uncharacterized protein.	Uncharacterized protein.	0.997
Gemin8.S	smn1	A0A1L8H8H6	A0A1L8HRB1	Uncharacterized protein.	Tudor domain-containing protein.	0.861
Gemin8.S	smn1-2	A0A1L8H8H6	Q6NU78	Uncharacterized protein.	LOC398438 protein.	0.908