Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1L8GEQ9 | Chgr20 | A0A1L8GEQ9 | A0A1L8FMU9 | Uncharacterized protein. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.777 |
A0A1L8GEQ9 | MGC154500 | A0A1L8GEQ9 | Q0IH99 | Uncharacterized protein. | MGC154500 protein. | 0.977 |
A0A1L8GEQ9 | alyref | A0A1L8GEQ9 | A0A1L8ETL9 | Uncharacterized protein. | RRM domain-containing protein. | 0.860 |
A0A1L8GEQ9 | cpsf6 | A0A1L8GEQ9 | A0A1L8GYJ4 | Uncharacterized protein. | RRM domain-containing protein. | 0.983 |
A0A1L8GEQ9 | cpsf7 | A0A1L8GEQ9 | A0A1L8GJ34 | Uncharacterized protein. | RRM domain-containing protein. | 0.977 |
A0A1L8GEQ9 | cstf2 | A0A1L8GEQ9 | Q7ZYT8 | Uncharacterized protein. | Cstf-64 protein. | 0.880 |
A0A1L8GEQ9 | pcf11 | A0A1L8GEQ9 | A0A1L8HB26 | Uncharacterized protein. | CID domain-containing protein. | 0.895 |
A0A1L8GEQ9 | sympk | A0A1L8GEQ9 | A0A1L8F3F9 | Uncharacterized protein. | Uncharacterized protein. | 0.857 |
A0A1L8GEQ9 | u2af2 | A0A1L8GEQ9 | A0A1L8FGS2 | Uncharacterized protein. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.777 |
Chgr20 | A0A1L8GEQ9 | A0A1L8FMU9 | A0A1L8GEQ9 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Uncharacterized protein. | 0.777 |
Chgr20 | MGC154500 | A0A1L8FMU9 | Q0IH99 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | MGC154500 protein. | 0.793 |
Chgr20 | alyref | A0A1L8FMU9 | A0A1L8ETL9 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | RRM domain-containing protein. | 0.899 |
Chgr20 | cpsf6 | A0A1L8FMU9 | A0A1L8GYJ4 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | RRM domain-containing protein. | 0.841 |
Chgr20 | cpsf7 | A0A1L8FMU9 | A0A1L8GJ34 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | RRM domain-containing protein. | 0.793 |
Chgr20 | cstf2 | A0A1L8FMU9 | Q7ZYT8 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Cstf-64 protein. | 0.655 |
Chgr20 | nudt21 | A0A1L8FMU9 | A0A1L8GKP2 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.777 |
Chgr20 | pcf11 | A0A1L8FMU9 | A0A1L8HB26 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | CID domain-containing protein. | 0.844 |
Chgr20 | u2af2 | A0A1L8FMU9 | A0A1L8FGS2 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.900 |
MGC154500 | A0A1L8GEQ9 | Q0IH99 | A0A1L8GEQ9 | MGC154500 protein. | Uncharacterized protein. | 0.977 |
MGC154500 | Chgr20 | Q0IH99 | A0A1L8FMU9 | MGC154500 protein. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.793 |
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