STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
best3Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (654 aa)    
Predicted Functional Partners:
ano8
Anoctamin.
      
 0.640
ano10l
Anoctamin.
      
 0.628
ano10
Anoctamin.
      
 0.570
ano6
Anoctamin.
      
 0.486
A0A1L8GMZ4
Pannexin_like domain-containing protein.
      
 0.481
Lrrc8b.S
Pannexin_like domain-containing protein.
      
 0.480
lrrc8b
Pannexin_like domain-containing protein.
      
 0.480
A0A1L8EKN4
Uncharacterized protein.
      
 0.478
lrrc8d
Pannexin_like domain-containing protein.
      
 0.439
lrrc8d-2
Pannexin_like domain-containing protein.
      
 0.439
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.