Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Man2b1.L | man2b2 | A0A1L8H306 | A0A1L8HT80 | Alpha-mannosidase. | Alpha-mannosidase. | 0.900 |
Man2b1.L | man2c1 | A0A1L8H306 | A0A1L8H053 | Alpha-mannosidase. | Alpha-mann_mid domain-containing protein. | 0.945 |
Oxct1.L | man2c1 | A0A1L8I381 | A0A1L8H053 | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | Alpha-mann_mid domain-containing protein. | 0.883 |
Oxct1.L | oxct1 | A0A1L8I381 | A0A1L8HRP3 | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.900 |
Rcn2.S | man2c1 | A0A1L8FGF5 | A0A1L8H053 | Uncharacterized protein. | Alpha-mann_mid domain-containing protein. | 0.679 |
apex1 | man2c1 | Q6IP62 | A0A1L8H053 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Alpha-mann_mid domain-containing protein. | 0.802 |
engase | man2c1 | A0A1L8ETR3 | A0A1L8H053 | BRCT domain-containing protein. | Alpha-mann_mid domain-containing protein. | 0.855 |
gne | man2c1 | A0A1L8HXN5 | A0A1L8H053 | Epimerase_2 domain-containing protein. | Alpha-mann_mid domain-containing protein. | 0.769 |
man2b2 | Man2b1.L | A0A1L8HT80 | A0A1L8H306 | Alpha-mannosidase. | Alpha-mannosidase. | 0.900 |
man2b2 | man2c1 | A0A1L8HT80 | A0A1L8H053 | Alpha-mannosidase. | Alpha-mann_mid domain-containing protein. | 0.945 |
man2c1 | Man2b1.L | A0A1L8H053 | A0A1L8H306 | Alpha-mann_mid domain-containing protein. | Alpha-mannosidase. | 0.945 |
man2c1 | Oxct1.L | A0A1L8H053 | A0A1L8I381 | Alpha-mann_mid domain-containing protein. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.883 |
man2c1 | Rcn2.S | A0A1L8H053 | A0A1L8FGF5 | Alpha-mann_mid domain-containing protein. | Uncharacterized protein. | 0.679 |
man2c1 | apex1 | A0A1L8H053 | Q6IP62 | Alpha-mann_mid domain-containing protein. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.802 |
man2c1 | engase | A0A1L8H053 | A0A1L8ETR3 | Alpha-mann_mid domain-containing protein. | BRCT domain-containing protein. | 0.855 |
man2c1 | gne | A0A1L8H053 | A0A1L8HXN5 | Alpha-mann_mid domain-containing protein. | Epimerase_2 domain-containing protein. | 0.769 |
man2c1 | man2b2 | A0A1L8H053 | A0A1L8HT80 | Alpha-mann_mid domain-containing protein. | Alpha-mannosidase. | 0.945 |
man2c1 | mib2 | A0A1L8H053 | A0A1L8FGA8 | Alpha-mann_mid domain-containing protein. | Uncharacterized protein. | 0.704 |
man2c1 | mib2-2 | A0A1L8H053 | A0A1L8FM48 | Alpha-mann_mid domain-containing protein. | Uncharacterized protein. | 0.704 |
man2c1 | oxct1 | A0A1L8H053 | A0A1L8HRP3 | Alpha-mann_mid domain-containing protein. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.883 |
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