STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkn1Uncharacterized protein. (942 aa)    
Predicted Functional Partners:
rac1
MGC114731 protein.
   
 0.910
rhoa
MGC64296 protein.
    
 0.888
rac3
RAC1 protein.
   
 0.856
rhoc
MGC52893 protein.
    
 0.823
Rhoa.S
Uncharacterized protein.
   
 0.771
A0A1L8GHD2
Uncharacterized protein.
    
 0.767
A0A1L8H6N1
Uncharacterized protein.
    
 0.767
nck1
Cytoplasmic protein.
    
 
 0.621
nck1-2
Cytoplasmic protein.
    
 
 0.621
actl6a
Baf53a-pending-prov protein; Belongs to the actin family.
   
 0.557
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.