STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknox1Homeobox domain-containing protein. (427 aa)    
Predicted Functional Partners:
pbx1
Homeobox domain-containing protein.
    
0.915
Nmt1.L
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
      
 0.794
hoxb1-2
Homeobox domain-containing protein.
   
 0.778
hoxb1
Homeobox domain-containing protein.
   
 0.777
pbx2
Homeobox domain-containing protein.
    
0.758
Nmt2.L
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
      
 0.745
A0A1L8F1R5
Homeobox domain-containing protein.
    
0.639
A0A1L8F3K5
Homeobox domain-containing protein.
    
0.639
A0A1L8F6G6
Homeobox domain-containing protein.
    
0.639
A0A1L8F6H3
PBC domain-containing protein.
    
 0.639
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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