STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L8H8W3Uncharacterized protein. (1214 aa)    
Predicted Functional Partners:
A0A1L8FGA0
Uncharacterized protein.
    
 0.855
Rhoa.S
Uncharacterized protein.
    
 0.607
A0A1L8GC72
Uncharacterized protein.
    
 0.607
A0A1L8GHD2
Uncharacterized protein.
    
 0.607
A0A1L8H6N1
Uncharacterized protein.
    
 0.607
rhob
MGC131029 protein.
    
 0.607
rhoa
MGC64296 protein.
    
 0.607
rhoc
MGC52893 protein.
    
 0.607
rnd3
MGC83857 protein.
    
 0.481
rnd3-2
MGC83149 protein.
    
 0.481
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.