STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krt78.6IF rod domain-containing protein; Belongs to the intermediate filament family. (619 aa)    
Predicted Functional Partners:
unc79
Uncharacterized protein.
    
 0.838
actr5
Uncharacterized protein; Belongs to the actin family.
    
 0.603
A0A1L8FL85
NFRKB_winged domain-containing protein.
    
 0.588
ino80
Uncharacterized protein.
    
 0.558
A0A1L8FGQ7
Uncharacterized protein.
   
 0.517
A0A1L8FMY4
Uncharacterized protein.
   
 0.517
LOC100049093
LOC100049093 protein.
    
  0.516
mcrs1
Mcrs1-prov protein.
    
  0.516
Ino80b.S
PAPA-1 domain-containing protein.
   
 0.507
Rbbp5.S
WD_REPEATS_REGION domain-containing protein.
    
 0.503
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.