STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L8HB74Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
fam32a
Uncharacterized protein.
   
  
 0.587
Ankrd42.L
ANK_REP_REGION domain-containing protein.
      
 0.578
LOC398701
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
      
 0.578
trmt1l
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.576
Wdr74.L
WD_REPEATS_REGION domain-containing protein.
      
 0.563
pcf11
CID domain-containing protein.
      
 0.563
rab30
Uncharacterized protein.
      
 0.561
A0A1L8HJW4
Uncharacterized protein.
      
 0.561
A0A1L8H321
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.559
A0A1L8HL86
Ig-like domain-containing protein.
      
 0.555
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.