STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L8HCF2Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
A0A1L8GI11
Uncharacterized protein.
    
 
 0.592
A0A1L8GQ52
Uncharacterized protein.
    
 
 0.592
Magi3.L
Uncharacterized protein.
    
 
 0.580
edrf1
Uncharacterized protein.
      
 0.570
A0A1L8G909
Uncharacterized protein.
      
 0.570
ift80
WD_REPEATS_REGION domain-containing protein.
      
 0.568
A0A1L8FB94
FYVE-type domain-containing protein.
      
 0.567
A0A1L8H602
S1-like domain-containing protein.
      
 0.566
Eif1ax.L
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
      
 0.566
f11r
LOC398627 protein.
      
 0.562
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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