STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmp17ZnMc domain-containing protein. (588 aa)    
Predicted Functional Partners:
timp2
MGC84288 protein.
   
 0.679
Q6GLM1_XENLA
NTR domain-containing protein.
   
 0.643
A0A1L8GQI3
NTR domain-containing protein.
   
 0.628
col4a5
Collagen IV NC1 domain-containing protein.
   
 0.574
A0A1L8F0K6
NTR domain-containing protein.
   
 0.516
timp-1
Tissue inhibitor of metalloproteinase-1.
   
 0.516
Mmp13l.S
ZnMc domain-containing protein.
   
 
0.505
col4a2
Collagen IV NC1 domain-containing protein.
   
 0.504
mmp13l
ZnMc domain-containing protein.
   
 
0.504
col8a1
C1q domain-containing protein.
   
 0.457
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.