STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubap2UBA domain-containing protein. (1189 aa)    
Predicted Functional Partners:
A0A1L8ETH9
WD_REPEATS_REGION domain-containing protein.
    
 
 0.736
A0A1L8FKW5
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
   0.715
txnl1
MGC81675 protein.
      
 0.679
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.618
scp2
LOC494715 protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.601
znf644
Uncharacterized protein.
    
 
 0.577
A0A1L8ETL3
Carrier domain-containing protein.
  
 0.570
aasdh
AMP-binding domain-containing protein.
  
 0.566
Ube4a.S
U-box domain-containing protein.
   
  
 0.562
ube4a
U-box domain-containing protein.
   
  
 0.562
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.