STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ndnf.LUncharacterized protein. (569 aa)    
Predicted Functional Partners:
lmbrd1
Uncharacterized protein.
      
 0.797
brinp2
MACPF domain-containing protein.
      
 0.793
brinp2-2
MACPF domain-containing protein.
      
 0.793
cemip
G8 domain-containing protein.
      
 0.792
Lrpap1.L
Uncharacterized protein.
      
 0.676
gpr88
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.674
Pcdh20.S
Uncharacterized protein.
      
 0.646
pcdh20
Uncharacterized protein.
      
 0.646
scara5
Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways.
      
 0.625
lrrn1
Xnlrr-1 protein.
      
 0.587
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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