STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rap1gds1Uncharacterized protein. (607 aa)    
Predicted Functional Partners:
tbcd
TFCD_C domain-containing protein.
   
  
 0.887
ncapg2
Uncharacterized protein.
      
 0.870
psme4
Uncharacterized protein.
      
 0.823
mms19
Uncharacterized protein.
      
 0.790
heatr6
DUF4042 domain-containing protein.
      
 0.677
Pacs2.L
Uncharacterized protein.
      
 0.674
Jup.S
Uncharacterized protein.
      
 0.671
relch
LisH domain-containing protein.
      
 0.671
Mybpc3.S
Uncharacterized protein.
      
 0.671
ralb-2
Uncharacterized protein.
   
 0.661
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.