STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L8HVB0CBM20 domain-containing protein. (403 aa)    
Predicted Functional Partners:
Epm2a.L
Uncharacterized protein.
    
 
 0.846
gabarapl1
Uncharacterized protein.
    
 
 0.719
Gbe1.S
Aamy domain-containing protein.
    
 
 0.624
Gbe1.L
Aamy domain-containing protein.
    
 
 0.624
Gyg1.S
Uncharacterized protein.
   
 
 0.613
A0A1L8GAQ2
Uncharacterized protein.
   
 
 0.613
Gyg2.L
Uncharacterized protein.
   
 
 0.613
A0A1L8GGF7
Uncharacterized protein.
    
 
 0.585
Agl.L
Uncharacterized protein.
    
 
 0.585
A0A1L8FH68
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.572
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.