STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ano8Anoctamin. (1071 aa)    
Predicted Functional Partners:
best3
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
      
 0.640
tbccd1
C-CAP/cofactor C-like domain-containing protein.
      
 0.570
A0A310TNB9
Uncharacterized protein.
      
 0.568
gins1
MGC80254 protein.
      
 0.560
Foxr1.L
Uncharacterized protein.
   
  
 0.559
A0A1L8FFC0
DUF4585 domain-containing protein.
    
 
 0.544
A0A1L8FKS7
DUF4585 domain-containing protein.
    
 
 0.544
Mreg.S
Uncharacterized protein.
      
 0.502
tm9sf4
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.495
Tm9sf4.L
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.495
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.