STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setbp1-2Uncharacterized protein. (1555 aa)    
Predicted Functional Partners:
Grid1.S
ANF_receptor domain-containing protein.
      
 0.882
Kdm6a.S
Uncharacterized protein.
   
 0.660
nsd3
Uncharacterized protein.
   
 
 0.634
dach1
Ski_Sno domain-containing protein.
      
 0.606
Dach1.S
Ski_Sno domain-containing protein.
      
 0.605
h3f3b
Histone H3; Belongs to the histone H3 family.
   
 0.596
A0A1L8EY07
Histone H3; Belongs to the histone H3 family.
   
 0.596
cenpa
Histone domain-containing protein.
   
 0.596
Myd88.S
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.596
A0A1L8FUP1
Histone domain-containing protein.
   
 0.596
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.