STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zic5-2Zic family member 5. (515 aa)    
Predicted Functional Partners:
Pax3.S
Uncharacterized protein.
   
 0.889
Pax3.L
Uncharacterized protein.
   
 0.889
msx1
Homeobox domain-containing protein.
    
 0.871
msx1-2
LOC100125666 protein.
   
 0.871
sox10-2
HMG box domain-containing protein.
    
 0.840
sox10
HMG box domain-containing protein.
    
 0.839
sox9-a
Sex determining region Y-box 9.
   
 0.781
Sox2.S
HMG box domain-containing protein.
   
 0.728
tfap2a
TF_AP-2 domain-containing protein.
    
 
 0.704
Tfap2a.L
TF_AP-2 domain-containing protein.
    
 
 0.704
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.