STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
basp1MGC132184 protein. (236 aa)    
Predicted Functional Partners:
A0A1L8GTS7
PHD-type domain-containing protein.
      
 0.792
marcks
Uncharacterized protein.
   
 
 0.757
marcks-2
Uncharacterized protein.
     
 0.756
cap2-2
Adenylyl cyclase-associated protein; Belongs to the CAP family.
      
 0.646
sh2d4a
SH2 domain-containing protein.
      
 0.577
sh2d4a-2
SH2 domain-containing protein.
      
 0.577
Marcksl1.S
Uncharacterized protein.
   
  
 0.557
Rhof.S
Uncharacterized protein.
    
  0.546
Rhof.L
Uncharacterized protein.
    
  0.546
mllt6
Uncharacterized protein.
      
 0.503
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.