STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpalpp1MGC114989 protein. (337 aa)    
Predicted Functional Partners:
wdr6
WD_REPEATS_REGION domain-containing protein.
      
 0.575
ccdc82
Uncharacterized protein.
      
 0.574
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
  
 0.574
A0A1L8FZM6
Uncharacterized protein.
   
  
 0.570
A0A1L8FTM4
Uncharacterized protein.
      
 0.566
Sptlc1.L
Aminotran_1_2 domain-containing protein.
      
 0.565
lrrc39
Uncharacterized protein.
   
  
 0.556
lrrc2
Uncharacterized protein.
   
  
 0.556
tbl2
WD_REPEATS_REGION domain-containing protein.
      
 0.530
Tbl2.L
WD_REPEATS_REGION domain-containing protein.
      
 0.530
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.