STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aplp1MGC115336 protein. (643 aa)    
Predicted Functional Partners:
apbb1
Uncharacterized protein.
    
 0.841
sorl1
Uncharacterized protein.
    
 0.783
ncstn
Ncstrn_small domain-containing protein.
    
 0.684
ncstn-2
Ncstrn_small domain-containing protein.
    
 0.684
prnp-2
MGC84114 protein; Belongs to the prion family.
   
 0.599
A0A1L8HB09
Uncharacterized protein.
   
 
 0.597
A0A1L8HJ90
Uncharacterized protein.
   
 
 0.597
A0A1L8HJ98
Uncharacterized protein.
   
 
 0.597
mtss1l
Uncharacterized protein.
   
 0.588
mtss1l-2
Uncharacterized protein.
   
 0.588
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.