STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaLOC496249 protein. (347 aa)    
Predicted Functional Partners:
Ggt1.S
Uncharacterized protein.
   
  
 0.895
ggt1
Uncharacterized protein.
   
  
 0.890
asnsd1
Asparagine synthetase domain-containing protein.
     
 0.805
asns
Glutamine amidotransferase type-2 domain-containing protein.
     
 0.805
OTC
Ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
     
 0.731
asl
Uncharacterized protein.
     
 0.729
slc25a20
LOC495458 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.678
slc25a20-2
Slc25a20-prov protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.625
nsun5
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.559
rsph6a
Uncharacterized protein.
      
 0.556
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.