STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr5LOC495313 protein; Belongs to the Toll-like receptor family. (878 aa)    
Predicted Functional Partners:
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.993
Myd88.S
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.973
tlrs5
Tlrs5 protein.
  
  
 
0.908
A0A1L8FTB8
ML domain-containing protein.
   
 0.856
Traf6.L
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.817
irak4
Protein kinase domain-containing protein.
   
 0.797
unc93b1
Uncharacterized protein.
    
 0.784
il10
Uncharacterized protein.
   
 
 0.749
il10-2
Uncharacterized protein.
   
 
 0.749
Traf6.S
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.719
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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