STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgrrf1MGC85426 protein. (334 aa)    
Predicted Functional Partners:
mphosph8
Uncharacterized protein.
    
 
 0.682
dennd1a
UDENN domain-containing protein.
      
 0.674
irak1bp1
Uncharacterized protein.
      
 0.673
epyc
LRRNT domain-containing protein.
      
 0.671
epyc-2
LRRNT domain-containing protein.
      
 0.671
mphosph8-2
Uncharacterized protein.
    
 
 0.641
psme1
LOC494646 protein.
    
 
 0.630
cox7a2
Cox7a2a protein.
      
 0.576
cgref1
Uncharacterized protein.
      
 0.568
Cgref1.L
Uncharacterized protein.
      
 0.568
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.