STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sssca1-2MGC82778 protein. (189 aa)    
Predicted Functional Partners:
slc25a45
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.960
slc25a45-2
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.960
frmd8
FERM domain-containing protein.
   
  
 0.940
dpf2
Uncharacterized protein.
   
  
 0.899
kcnk7
Potassium channel subfamily K member.
      
 0.799
ltbp3
Uncharacterized protein.
      
 0.720
ltbp3-2
Uncharacterized protein.
      
 0.720
Cct5.S
Uncharacterized protein.
    
   0.712
Upp2.S
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
      
 0.550
upp2
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
      
 0.550
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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