STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
graspPDZ domain-containing protein. (352 aa)    
Predicted Functional Partners:
lrrtm1
Uncharacterized protein.
    
 
 0.631
lrrtm1-2
Uncharacterized protein.
    
 
 0.631
Ift57.S
Ig-like domain-containing protein.
    
 0.619
ift80
WD_REPEATS_REGION domain-containing protein.
    
 0.616
ift172
Uncharacterized protein.
    
 0.607
ntn1
Uncharacterized protein.
    
 
 0.575
ift88
Uncharacterized protein.
    
 0.561
cluap1
Uncharacterized protein.
    
 0.546
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.545
cask-2
Cask-prov protein; Belongs to the MAGUK family.
    
  0.545
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.