STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT90995.1Preproteins translocase J; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
AIT90999.1
Preprotein translocase T; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.972
ssaR
Type III secretion system protein SsaR; Part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.953
AIT90559.1
Low calcium response locus protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.918
AIT90997.1
Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.891
AIT91007.1
General secretion pathway protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.889
AIT90277.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.845
AIT90996.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
AIT90287.1
Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.821
AIT90460.1
Type III secretion translocator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.767
AIT90285.1
Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.708
Your Current Organism:
Chlamydia muridarum
NCBI taxonomy Id: 83560
Other names: ATCC VR-123, C. muridarum, Chlamydia trachomatis MoPn, agent of mouse pneumonitis, strain MoPn, strain Nigg, strain Nigg II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.