STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100485014FERM domain-containing protein. (507 aa)    
Predicted Functional Partners:
AMOT
Angiomotin.
    
 0.950
amotl1
Phosphoenolpyruvate carboxykinase 1.
    
 0.950
AMOTL2
Angiomotin like 2.
    
 0.946
nf2
FERM domain-containing protein.
  
  
0.904
LATS1
Large tumor suppressor kinase 1.
    
 
 0.869
lats2
Uncharacterized protein.
    
 
 0.856
hgs
Immunoglobulin heavy chain precursor.
    
 
 0.677
cd44
CD44 molecule (Indian blood group).
   
 
 0.636
dcaf1
NADPH oxidase 4.
    
 
 0.587
ddit3
Potassium channel, voltage gated subfamily E regulatory beta subunit 3.
     
  0.540
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.