STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ralgapa2Rap-GAP domain-containing protein. (1889 aa)    
Predicted Functional Partners:
rhoa.2
Nuclear receptor binding SET domain protein 3.
    
  0.907
ralgapb
SEC61 translocon gamma subunit.
   
 
0.563
GRIP2
Glutamate receptor interacting protein 2.
    
  0.504
rps27a
Ribosomal protein S27a.
    
  0.499
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
     
  0.499
rhob
Mannosidase, alpha, class 1A, member 2.
    
  0.447
gna13
LOC100145489 protein.
    
  0.440
naa15
Uncharacterized protein.
   
 
  0.403
unc13c
Acetyl-CoA acyltransferase 1.
   
 
  0.401
RNFT2
Ring finger protein, transmembrane 2.
     
  0.400
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.