STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etv2Dachsous cadherin-related 2. (368 aa)    
Predicted Functional Partners:
pax5
Immunoglobulin kappa variable 7-3 (pseudogene).
   
 
 0.615
mfsd4a-2
Major facilitator superfamily domain-containing protein 4A.
   
 
 0.527
RUNX3
Runt-related transcription factor.
   
 
 0.524
runx1
Runt-related transcription factor.
   
 
 0.524
runx2
Runt-related transcription factor.
   
 
 0.524
b4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
  
   
 0.513
pax8
Paired box protein Pax-8; Probable transcription factor. Involved in kidney development, acting synergistically with lhx1/lim-1 to establish the pronephric primordium in late gastrulae/early neurulae (By similarity).
   
 
 0.511
ascl2
BHLH domain-containing protein.
  
 
 0.490
icam5
Zinc finger DHHC-type containing 17.
  
     0.469
ugt2b4
LIM domain containing preferred translocation partner in lipoma.
  
     0.459
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.