Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AP4E1 | RUSC2 | ENSXETP00000052934 | ENSXETP00000001174 | AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. | RUN domain-containing protein. | 0.580 |
AP4E1 | atg9a | ENSXETP00000052934 | ENSXETP00000024705 | AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.612 |
AP4E1 | serinc3 | ENSXETP00000052934 | ENSXETP00000006423 | AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. | Tumor differentially expressed 1. | 0.495 |
RUSC2 | AP4E1 | ENSXETP00000001174 | ENSXETP00000052934 | RUN domain-containing protein. | AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. | 0.580 |
RUSC2 | atg9a | ENSXETP00000001174 | ENSXETP00000024705 | RUN domain-containing protein. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.535 |
RUSC2 | serinc3 | ENSXETP00000001174 | ENSXETP00000006423 | RUN domain-containing protein. | Tumor differentially expressed 1. | 0.506 |
atg9a | AP4E1 | ENSXETP00000024705 | ENSXETP00000052934 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. | 0.612 |
atg9a | RUSC2 | ENSXETP00000024705 | ENSXETP00000001174 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | RUN domain-containing protein. | 0.535 |
atg9a | serinc3 | ENSXETP00000024705 | ENSXETP00000006423 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Tumor differentially expressed 1. | 0.455 |
rho | serinc3 | ENSXETP00000048674 | ENSXETP00000006423 | Rhodopsin. | Tumor differentially expressed 1. | 0.472 |
serinc3 | AP4E1 | ENSXETP00000006423 | ENSXETP00000052934 | Tumor differentially expressed 1. | AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. | 0.495 |
serinc3 | RUSC2 | ENSXETP00000006423 | ENSXETP00000001174 | Tumor differentially expressed 1. | RUN domain-containing protein. | 0.506 |
serinc3 | atg9a | ENSXETP00000006423 | ENSXETP00000024705 | Tumor differentially expressed 1. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.455 |
serinc3 | rho | ENSXETP00000006423 | ENSXETP00000048674 | Tumor differentially expressed 1. | Rhodopsin. | 0.472 |
serinc3 | tex10 | ENSXETP00000006423 | ENSXETP00000041290 | Tumor differentially expressed 1. | Ipi1_N domain-containing protein. | 0.414 |
tex10 | serinc3 | ENSXETP00000041290 | ENSXETP00000006423 | Ipi1_N domain-containing protein. | Tumor differentially expressed 1. | 0.414 |