STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxred2Uncharacterized protein. (773 aa)    
Predicted Functional Partners:
sel1l
Adenosine monophosphate deaminase 3.
    
 
 0.694
txn2
TNF superfamily member 13b.
 
  
 
 0.648
rasd2
RASD family, member 2.
    
 
 0.611
hmgxb4
HMG box-containing protein 4; Negatively regulates Wnt/beta-catenin signaling during development.
      
 0.579
ndor1
NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
  
 0.576
txndc16
Thioredoxin domain-containing protein.
    
 
 0.563
nenf
Neuron derived neurotrophic factor; Belongs to the cytochrome b5 family.
    
 
 0.555
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
    
 
 0.494
atp6v1e1-2
ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1.
    
 
 0.485
sumf2
DNA replication licensing factor mcm5.
      
 0.480
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.